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Article

Gene-Based Predictive Modelling for Enhanced Detection of Systemic Lupus Erythematosus Using CNN-Based DL Algorithm

by
Jothimani Subramani
1,
G. Sathish Kumar
2 and
Thippa Reddy Gadekallu
3,4,*
1
Department of Information Technology, Bannari Amman Institute of Technology, Sathyamangalam 638401, Tamil Nadu, India
2
Department of Artificial Intelligence and Data Science, Sri Eshwar College of Engineering, Coimbatore 641202, Tamil Nadu, India
3
Division of Research and Development, Lovely Professional University, Phagwara 144411, India
4
Center of Research Impact and Outcome, Chitkara University, Rajpura 140401, Punjab, India
*
Author to whom correspondence should be addressed.
Diagnostics 2024, 14(13), 1339; https://doi.org/10.3390/diagnostics14131339
Submission received: 21 May 2024 / Revised: 13 June 2024 / Accepted: 20 June 2024 / Published: 24 June 2024
(This article belongs to the Section Machine Learning and Artificial Intelligence in Diagnostics)

Abstract

Systemic Lupus Erythematosus (SLE) is a multifaceted autoimmune disease that presents with a diverse array of clinical signs and unpredictable disease progression. Conventional diagnostic methods frequently fall short in terms of sensitivity and specificity, which can result in delayed diagnosis and less-than-optimal management. In this study, we introduce a novel approach for improving the identification of SLE through the use of gene-based predictive modelling and Stacked deep learning classifiers. The study proposes a new method for diagnosing SLE using Stacked Deep Learning Classifiers (SDLC) trained on Gene Expression Omnibus (GEO) database data. By combining transcriptomic data from GEO with clinical features and laboratory results, the SDLC model achieves a remarkable accuracy value of 0.996, outperforming traditional methods. Individual models within the SDLC, such as SBi-LSTM and ACNN, achieved accuracies of 92% and 95%, respectively. The SDLC’s ensemble learning approach allows for identifying complex patterns in multi-modal data, enhancing accuracy in diagnosing SLE. This study emphasises the potential of deep learning methods, in conjunction with open repositories like GEO, to advance the diagnosis and management of SLE. Overall, this research shows strong performance and potential for improving precision medicine in managing SLE.
Keywords: Systemic Lupus Erythematosus (SLE); deep learning; Stacked Deep Learning Classifiers (SDLC); Gene Expression Omnibus (GEO) database; diagnosis; precision medicine; autoimmune disease Systemic Lupus Erythematosus (SLE); deep learning; Stacked Deep Learning Classifiers (SDLC); Gene Expression Omnibus (GEO) database; diagnosis; precision medicine; autoimmune disease

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MDPI and ACS Style

Subramani, J.; Kumar, G.S.; Gadekallu, T.R. Gene-Based Predictive Modelling for Enhanced Detection of Systemic Lupus Erythematosus Using CNN-Based DL Algorithm. Diagnostics 2024, 14, 1339. https://doi.org/10.3390/diagnostics14131339

AMA Style

Subramani J, Kumar GS, Gadekallu TR. Gene-Based Predictive Modelling for Enhanced Detection of Systemic Lupus Erythematosus Using CNN-Based DL Algorithm. Diagnostics. 2024; 14(13):1339. https://doi.org/10.3390/diagnostics14131339

Chicago/Turabian Style

Subramani, Jothimani, G. Sathish Kumar, and Thippa Reddy Gadekallu. 2024. "Gene-Based Predictive Modelling for Enhanced Detection of Systemic Lupus Erythematosus Using CNN-Based DL Algorithm" Diagnostics 14, no. 13: 1339. https://doi.org/10.3390/diagnostics14131339

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